Kidney Stone Status in Waste Nephrectomy Samples Specific Tubular and Interstitial Cellular Protein and Gene Expressions

Overview

About this study

The purpose of this study is to obtain sufficient fresh kidney tissue from patients with history of kidney stones or without a history of kidney stones to perform assay transposase accessible chromatin (ATAC), cellular indexing of transcriptomes and epitomes (CITE), and RNA expression and protein (REAP) sequencing studies on fresh, snap frozen versus paraffin embedded samples.  Differential expression of renal interstitial cells, genes and encoded proteins will be confirmed by flow cytometry, qPCR, and immunofluorescence/immunohistochemistry respectively.  In addition, random urine and plasma/serum will be biobanked for biomarker studies to correlate with findings in the kidney tissue.

Participation eligibility

Participant eligibility includes age, gender, type and stage of disease, and previous treatments or health concerns. Guidelines differ from study to study, and identify who can or cannot participate. There is no guarantee that every individual who qualifies and wants to participate in a trial will be enrolled. Contact the study team to discuss study eligibility and potential participation.

Inclusion Criteria:

  • 10 subjects will have history of kidney stones, 10 subjects will not have history of kidney stones.

Exclusion Criteria: 

  • Subjects not scheduled for a total nephrectomy for renal cell cancer.

Note: Other protocol defined Inclusion/Exclusion criteria may apply.

Eligibility last updated 9/28/23. Questions regarding updates should be directed to the study team contact.

Participating Mayo Clinic locations

Study statuses change often. Please contact the study team for the most up-to-date information regarding possible participation.

Mayo Clinic Location Status Contact

Rochester, Minn.

Mayo Clinic principal investigator

John Lieske, M.D.

Open for enrollment

Contact information:

Karen Friedt

(507) 284-0944

Friedt.Karen@mayo.edu

More information

Publications

Publications are currently not available
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CLS-20563364

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